STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livEBranched-chain amino acid ABC transporter,ATP-binding protein. (234 aa)    
Predicted Functional Partners:
livC
Branched-chain amino acid ABC transporter,permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livD
Branched-chain amino acid ABC transporter,ATP-binding protein.
 
 
0.998
livB
Branched-chain amino acid ABC transporter,permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livA
Branched-chain amino acid ABC transporter,substrate binding protein.
 
 
 0.998
acuB-N
Acetoin utilization protein, N-terminal fragment.
 
    0.959
acuB-C
Acetoin utilization protein, C-terminal fragment.
 
    0.932
lp_2774
ABC transporter, ATP-binding protein.
 
     
0.899
lp_2739
ABC transporter, ATP-binding protein.
 
     
0.583
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
       0.468
mtsC
Manganese ABC transporter, ATP-binding protein.
 
 
   
0.401
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.