STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_2991Transcription regulator, Cro/CI family. (223 aa)    
Predicted Functional Partners:
gtcA3
Teichoic acid glycosylation protein.
   
  
 0.762
mntH2
Manganese transport protein MntH, Nramp superfamily.
      
 0.655
pyrR2
Pyrimidine operon regulator; Regulates transcriptional attenuation of the pyrimidine nucleotide (pyr) operon by binding in a uridine-dependent manner to specific sites on pyr mRNA. This disrupts an antiterminator hairpin in the RNA and favors formation of a downstream transcription terminator, leading to a reduced expression of downstream genes (By similarity). Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
      
 0.633
mntA
Cadmium-/manganese-transporting P-type ATPase.
   
  
 0.565
plnR
Plantaricin biosynthesis protein PlnR.
   
  
 0.516
plnW
Hypothetical membrane protein PlnW,membrane-bound protease CAAX family.
   
  
 0.505
bsh1
Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family.
  
   
 0.484
mntH1
Manganese transport protein MntH, Nramp superfamily; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.444
tagO
Undecaprenyl-phosphate N-acetyl-glucosaminyl transferase.
   
  
 0.433
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
      
 0.430
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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