STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lp_3000ABC transporter, ATP-binding and permease protein. (666 aa)    
Predicted Functional Partners:
lp_2856
ABC transporter, permease protein.
  
 
 0.950
lp_1393
ABC transporter, ATP-binding and permease protein.
  
 
 0.764
hpk2
Two-component system histidine protein kinase; sensor protein.
  
 
 0.611
hpk7
Two-component system histidine protein kinase; sensor protein.
  
 
 0.611
lamC
Two-component system histidine protein kinase; sensor protein.
  
 
 0.611
lp_2858
ABC transporter, ATP-binding protein,N-terminal domain.
 
 
 0.545
lp_3001
Cell surface protein precursor, LPXTG-motif cell wall anchor.
 
    0.526
pkn1
Serine/threonine protein kinase.
  
  
 0.489
lp_0299
ABC transporter, ATP-binding protein.
 
 
0.488
lp_0046
Transcription regulator, TetR family.
 
 
 0.467
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.