STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3040Multidrug ABC transporter, ATP-binding and permease protein. (593 aa)    
Predicted Functional Partners:
lp_3042
Multidrug ABC transporter, ATP-binding and permease protein.
 
0.990
potA
Spermidine/putrescine ABC transporter,ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
   
0.901
lp_1750
Iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   
0.900
oppF
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    
0.843
lp_2739
ABC transporter, ATP-binding protein.
  
0.727
lp_3038
Hypothetical membrane protein.
  
    0.727
lp_2395
ABC transporter, ATP-binding and permease protein.
 
 
0.597
lp_2740
ABC transporter, permease protein.
  
  
 0.532
lp_2743
ABC transporter, ATP-binding protein.
   
  
 0.529
glnQ4
Glutamine/histidine ABC transporter,ATP-binding protein.
 
     
0.475
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (28%) [HD]