fhuB protein (Lactobacillus plantarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

fhuB

Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (332 aa)

Predicted Functional Partners:

fhuC

0.998

fhuD

0.974

fecE

0.949

fhuG

0.946

fecB

0.884

lp_1257

0.745

lp_3107

0.442

Your Current Organism:

Lactobacillus plantarum

NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fecB	fecE	lp_1473	lp_1475	Iron chelatin ABC transporter, substrate binding protein.	Iron chelatin ABC transporter, ATP-binding protein.	0.947
fecB	fhuB	lp_1473	lp_3105	Iron chelatin ABC transporter, substrate binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.884
fecB	fhuC	lp_1473	lp_3104	Iron chelatin ABC transporter, substrate binding protein.	Iron chelatin ABC transporter, ATP-binding protein.	0.861
fecB	fhuG	lp_1473	lp_3106	Iron chelatin ABC transporter, substrate binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.907
fecE	fecB	lp_1475	lp_1473	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, substrate binding protein.	0.947
fecE	fhuB	lp_1475	lp_3105	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.949
fecE	fhuD	lp_1475	lp_3103	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, substrate binding protein.	0.773
fecE	fhuG	lp_1475	lp_3106	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.962
fecE	lp_1257	lp_1475	lp_1257	Iron chelatin ABC transporter, ATP-binding protein.	Hypothetical protein.	0.778
fhuB	fecB	lp_3105	lp_1473	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelatin ABC transporter, substrate binding protein.	0.884
fhuB	fecE	lp_3105	lp_1475	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelatin ABC transporter, ATP-binding protein.	0.949
fhuB	fhuC	lp_3105	lp_3104	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelatin ABC transporter, ATP-binding protein.	0.998
fhuB	fhuD	lp_3105	lp_3103	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelatin ABC transporter, substrate binding protein.	0.974
fhuB	fhuG	lp_3105	lp_3106	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.946
fhuB	lp_1257	lp_3105	lp_1257	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Hypothetical protein.	0.745
fhuB	lp_3107	lp_3105	lp_3107	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	Transcription regulator, TetR family.	0.442
fhuC	fecB	lp_3104	lp_1473	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, substrate binding protein.	0.861
fhuC	fhuB	lp_3104	lp_3105	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.998
fhuC	fhuD	lp_3104	lp_3103	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, substrate binding protein.	0.982
fhuC	fhuG	lp_3104	lp_3106	Iron chelatin ABC transporter, ATP-binding protein.	Iron chelatin ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.998

page 1 of 2

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About