Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroD4 | lp_0130 | lp_3499 | lp_0130 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Two-component system sensor protein. | 0.548 |
| aroD4 | lp_0131 | lp_3499 | lp_0131 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Two-component system response regulator. | 0.548 |
| aroD4 | lp_3184 | lp_3499 | lp_3184 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Branched-chain amino acid transport protein. | 0.548 |
| aroD4 | lp_3185 | lp_3499 | lp_3185 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Branched-chain amino acid transport protein. | 0.548 |
| aroD4 | lp_3497 | lp_3499 | lp_3497 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate transport protein. | 0.971 |
| aroD4 | tauE2 | lp_3499 | lp_3183 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Sulfite export protein. | 0.568 |
| brnF | lp_3184 | lp_0982 | lp_3184 | Branched-chain amino acid transport protein. | Branched-chain amino acid transport protein. | 0.632 |
| lp_0130 | aroD4 | lp_0130 | lp_3499 | Two-component system sensor protein. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.548 |
| lp_0130 | lp_0131 | lp_0130 | lp_0131 | Two-component system sensor protein. | Two-component system response regulator. | 0.991 |
| lp_0130 | lp_3184 | lp_0130 | lp_3184 | Two-component system sensor protein. | Branched-chain amino acid transport protein. | 0.639 |
| lp_0130 | lp_3185 | lp_0130 | lp_3185 | Two-component system sensor protein. | Branched-chain amino acid transport protein. | 0.639 |
| lp_0130 | lp_3497 | lp_0130 | lp_3497 | Two-component system sensor protein. | Shikimate transport protein. | 0.639 |
| lp_0130 | tauE2 | lp_0130 | lp_3183 | Two-component system sensor protein. | Sulfite export protein. | 0.684 |
| lp_0131 | aroD4 | lp_0131 | lp_3499 | Two-component system response regulator. | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.548 |
| lp_0131 | lp_0130 | lp_0131 | lp_0130 | Two-component system response regulator. | Two-component system sensor protein. | 0.991 |
| lp_0131 | lp_3184 | lp_0131 | lp_3184 | Two-component system response regulator. | Branched-chain amino acid transport protein. | 0.647 |
| lp_0131 | lp_3185 | lp_0131 | lp_3185 | Two-component system response regulator. | Branched-chain amino acid transport protein. | 0.639 |
| lp_0131 | lp_3497 | lp_0131 | lp_3497 | Two-component system response regulator. | Shikimate transport protein. | 0.645 |
| lp_0131 | tauE2 | lp_0131 | lp_3183 | Two-component system response regulator. | Sulfite export protein. | 0.732 |
| lp_1833 | lp_1992 | lp_1833 | lp_1992 | Integrase, N-terminal SAM-like; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.509 |
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