STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrp11Two component system response regulator. (229 aa)    
Predicted Functional Partners:
hpk11
Two component system histidine protein kinase; sensor protein.
 
 0.994
hpk7
Two-component system histidine protein kinase; sensor protein.
 
 0.899
hpk5
Two-component system histidine protein kinase; sensor protein.
 
 0.869
hpk1
Two-component system histidine protein kinase; sensor protein.
 
 0.852
hpk2
Two-component system histidine protein kinase; sensor protein.
 
 0.848
hpk3
Two-component system histidine kinase, sensor protein, phosphate transport regulon.
 
 0.845
dacA1
Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.801
ribC2
Bifunctional protein: riboflavin kinase; FMN adenylyltransferase; Belongs to the ribF family.
 
  
 0.799
lamC
Two-component system histidine protein kinase; sensor protein.
  
 
 0.618
exoA
Exodeoxyribonuclease III.
  
  
 0.553
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.