Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lp_3205Cell surface hydrolase, DUF915 family,membrane-bound. (277 aa)    
Predicted Functional Partners:
lp_2737
Cell surface hydrolase, DUF915 family,membrane-bound.
  
     0.775
lp_3265
Cell surface hydrolase, membrane-bound.
   
  
 0.766
lp_3127
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
   
 0.735
dltD
Poly(glycerophosphate chain) D-alanine transfer protein DltD.
 
     0.705
pts13C
PTS system, cellobiose-specific EIIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
    0.699
lp_2795
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
   
 0.677
lp_0800
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
   
 0.676
lp_3117
Cell surface protein, CscC family.
  
   
 0.674
lp_0618
Cell surface hydrolase, membrane-bound, DUF915 family.
  
     0.658
zmp4
Extracellular zinc metalloproteinase.
  
  
 0.656
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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