STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3209Cystine ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 3 family. (267 aa)    
Predicted Functional Partners:
lp_3210
Cystine ABC transporter, permease protein.
 0.999
lp_3211
Cystine ABC transporter, ATP-binding protein.
 
 0.993
glnP2
Glutamine/histidine ABC transporter, permease protein.
 
 0.948
glnP1
Glutamine ABC transporter, permease protein.
 
 
 0.906
lp_3214
Cystathionine ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
  
 
 
0.906
glnM
Glutamine ABC transporter, permease protein.
 
 0.870
glnQ1
Glutamine ABC transporter, ATP-binding protein.
 
 
 0.817
glnQ3
Glutamine ABC transporter, ATP-binding protein.
 
 
 0.792
glnQ2
Glutamine ABC transporter, ATP-binding protein.
 
 
 0.791
glnQ4
Glutamine/histidine ABC transporter,ATP-binding protein.
 
 
 0.684
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.