STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3210Cystine ABC transporter, permease protein. (235 aa)    
Predicted Functional Partners:
lp_3209
Cystine ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.999
lp_3211
Cystine ABC transporter, ATP-binding protein.
 0.999
lp_3214
Cystathionine ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.997
glnQ1
Glutamine ABC transporter, ATP-binding protein.
 
 0.989
glnQ2
Glutamine ABC transporter, ATP-binding protein.
 
 0.988
glnQ3
Glutamine ABC transporter, ATP-binding protein.
 
 0.988
glnQ4
Glutamine/histidine ABC transporter,ATP-binding protein.
 
 0.984
glnH2
Glutamine/histidine ABC transporter, substrate binding protein.
 
 0.932
phnC
Phosphonates ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
    0.879
metN2
D-Methionine-like precursor ABC transporter,ATP binding binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 0.833
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.