STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pts27BCAPTS system, beta-glucosides-specific EIIBCA component. (649 aa)    
Predicted Functional Partners:
pts28ABC
PTS system, beta-glucosides-specific EIIABC component.
 
0.942
ptsH
Phosphocarrier protein Hpr.
  
 
 0.910
bglG2
Transcription antiterminator, BglB family.
 
 0.797
bglG3
Transcription antiterminator, BglB family.
 
 0.790
bglG4
Transcription antiterminator, BlgB family.
 
 0.789
bglG1
Transcription antiterminator, BlgB family.
 
 0.781
bglG5
Transcription antiterminator, BlgB family.
 
 0.775
lp_3228
Metal-dependent hydrolase.
  
    0.721
lp_3232
Hypothetical protein.
  
  
 0.607
lp_3233
Hypothetical protein.
  
    0.553
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.