Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lp_3286Hypothetical membrane protein, hemolysin III family. (212 aa)    
Predicted Functional Partners:
lp_2666
Hypothetical protein, DUF1836 family.
  
  
 0.769
lp_2671
Transport protein with CBS domains, DUF21 family.
     
 0.666
lp_1603
rRNA methylase.
     
 0.653
qacC
Quaternary ammonium compound-resistance protein.
  
  
 0.652
mleS
Malolactic enzyme; Involved in the malolactic fermentation (MLF) of wine, which results in a natural decrease in acidity and favorable changes in wine flavors. Catalyzes the decarboxylation of L-malate to L-lactate. Belongs to the malic enzymes family.
  
  
 0.560
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.551
qacH
Quaternary ammonium compound-resistance protein.
  
  
 0.527
czcD2
Cation (cobalt-zinc-cadmium) efflux protein.
 
  
 0.507
lp_0689
Cell surface protein, lipoprotein precursor.
     
 0.440
lp_3287
Transcription regulator, ArsR family.
     
 0.429
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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