STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3287Transcription regulator, ArsR family. (114 aa)    
Predicted Functional Partners:
czcD2
Cation (cobalt-zinc-cadmium) efflux protein.
  
  
 0.598
arsR
Regulator of arsenical resistance.
 
  
 0.594
cadC
Putative positive regulator of cadmium resistance.
  
     0.534
copB
Copper transporting ATPase.
 
  
 0.489
cadA
Cadmium transporting P-type ATPase.
 
  
 0.487
copA
Copper transporting ATPase.
 
  
 0.485
lp_3286
Hypothetical membrane protein, hemolysin III family.
     
 0.444
lp_3327
Cadmium-/zinc-/cobalt-transporting ATPase.
  
  
 0.417
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.