czcD2 protein (Lactobacillus plantarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

czcD2

Cation (cobalt-zinc-cadmium) efflux protein. (295 aa)

Predicted Functional Partners:

pflE

0.654

lp_3287

0.633

tkt3

0.598

ndk

0.596

glpF3

0.562

copR

0.549

tkt1A

0.534

tkt2

0.533

infC

0.533

pps

0.533

Your Current Organism:

Lactobacillus plantarum

NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
copR	czcD2	lp_3365	lp_3288	Transcription regulator of CopAB ATPases.	Cation (cobalt-zinc-cadmium) efflux protein.	0.549
czcD2	copR	lp_3288	lp_3365	Cation (cobalt-zinc-cadmium) efflux protein.	Transcription regulator of CopAB ATPases.	0.549
czcD2	glpF3	lp_3288	lp_0372	Cation (cobalt-zinc-cadmium) efflux protein.	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.562
czcD2	infC	lp_3288	lp_1515	Cation (cobalt-zinc-cadmium) efflux protein.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.533
czcD2	lp_3287	lp_3288	lp_3287	Cation (cobalt-zinc-cadmium) efflux protein.	Transcription regulator, ArsR family.	0.633
czcD2	ndk	lp_3288	lp_0242	Cation (cobalt-zinc-cadmium) efflux protein.	Nucleoside-diphosphate kinase; Belongs to the NDK family.	0.596
czcD2	pflE	lp_3288	lp_2596	Cation (cobalt-zinc-cadmium) efflux protein.	Formate acetyltransferase activating enzyme.	0.654
czcD2	pps	lp_3288	lp_1912	Cation (cobalt-zinc-cadmium) efflux protein.	Phosphoenolpyruvate synthase (pyruvate phosphate dikinase); Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.	0.533
czcD2	tkt1A	lp_3288	lp_0489	Cation (cobalt-zinc-cadmium) efflux protein.	Transketolase, thiamine diphosphate binding domain.	0.534
czcD2	tkt2	lp_3288	lp_1083	Cation (cobalt-zinc-cadmium) efflux protein.	Transketolase; Belongs to the transketolase family.	0.533
czcD2	tkt3	lp_3288	lp_3135	Cation (cobalt-zinc-cadmium) efflux protein.	Transketolase; Belongs to the transketolase family.	0.598
glpF3	czcD2	lp_0372	lp_3288	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Cation (cobalt-zinc-cadmium) efflux protein.	0.562
glpF3	infC	lp_0372	lp_1515	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.412
glpF3	ndk	lp_0372	lp_0242	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Nucleoside-diphosphate kinase; Belongs to the NDK family.	0.712
glpF3	pflE	lp_0372	lp_2596	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Formate acetyltransferase activating enzyme.	0.429
infC	czcD2	lp_1515	lp_3288	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Cation (cobalt-zinc-cadmium) efflux protein.	0.533
infC	glpF3	lp_1515	lp_0372	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol and H(2)O(2). Is not permeable to urea and D/L-lactic acid; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.412
infC	ndk	lp_1515	lp_0242	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Nucleoside-diphosphate kinase; Belongs to the NDK family.	0.467
infC	pflE	lp_1515	lp_2596	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Formate acetyltransferase activating enzyme.	0.435
lp_3287	czcD2	lp_3287	lp_3288	Transcription regulator, ArsR family.	Cation (cobalt-zinc-cadmium) efflux protein.	0.633

page 1 of 3

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About