STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lp_3333Hypothetical protein. (394 aa)    
Predicted Functional Partners:
lp_0923
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
    0.784
lp_3064
Cell surface protein, CscC family.
  
    0.755
lp_2486
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
     0.753
lp_2975
Cell surface protein, CscC family.
  
     0.746
lp_3127
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
     0.739
lp_3114
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
    0.730
lp_1081
Hypothetical protein.
  
    0.725
ISP2_4C
Transposase, C-terminal fragment.
       0.709
zmp2
Extracellular zinc metalloproteinase, M10 family.
  
    0.693
lp_0919
Membrane-bound protease, CAAX family.
  
     0.630
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.