Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaB | dnaI | lp_1512 | lp_1513 | Replication initiation and membrane attachment protein DnaB. | Primosomal protein DnaI. | 0.977 |
| dnaB | lp_1535 | lp_1512 | lp_1535 | Replication initiation and membrane attachment protein DnaB. | Hypothetical protein. | 0.741 |
| dnaB | lp_2061 | lp_1512 | lp_2061 | Replication initiation and membrane attachment protein DnaB. | Hypothetical protein. | 0.626 |
| dnaB | recU | lp_1512 | lp_1752 | Replication initiation and membrane attachment protein DnaB. | Recombinase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.583 |
| dnaB | rpoE | lp_1512 | lp_0480 | Replication initiation and membrane attachment protein DnaB. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.407 |
| dnaB | spx4 | lp_1512 | lp_3345 | Replication initiation and membrane attachment protein DnaB. | RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily; Belongs to the ArsC family. | 0.499 |
| dnaI | dnaB | lp_1513 | lp_1512 | Primosomal protein DnaI. | Replication initiation and membrane attachment protein DnaB. | 0.977 |
| dnaI | lp_1535 | lp_1513 | lp_1535 | Primosomal protein DnaI. | Hypothetical protein. | 0.555 |
| dnaI | lp_2061 | lp_1513 | lp_2061 | Primosomal protein DnaI. | Hypothetical protein. | 0.549 |
| dnaI | recU | lp_1513 | lp_1752 | Primosomal protein DnaI. | Recombinase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.788 |
| dnaI | rpoE | lp_1513 | lp_0480 | Primosomal protein DnaI. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.521 |
| dnaI | spx4 | lp_1513 | lp_3345 | Primosomal protein DnaI. | RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily; Belongs to the ArsC family. | 0.572 |
| lp_1351 | spx4 | lp_1351 | lp_3345 | Thioredoxin-fold protein, DsbA family,FrnE-like subfamily. | RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily; Belongs to the ArsC family. | 0.508 |
| lp_1535 | dnaB | lp_1535 | lp_1512 | Hypothetical protein. | Replication initiation and membrane attachment protein DnaB. | 0.741 |
| lp_1535 | dnaI | lp_1535 | lp_1513 | Hypothetical protein. | Primosomal protein DnaI. | 0.555 |
| lp_1535 | lp_2061 | lp_1535 | lp_2061 | Hypothetical protein. | Hypothetical protein. | 0.664 |
| lp_1535 | recU | lp_1535 | lp_1752 | Hypothetical protein. | Recombinase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. | 0.629 |
| lp_1535 | rpoA | lp_1535 | lp_1062 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.822 |
| lp_1535 | rpoE | lp_1535 | lp_0480 | Hypothetical protein. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.439 |
| lp_1535 | spx4 | lp_1535 | lp_3345 | Hypothetical protein. | RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily; Belongs to the ArsC family. | 0.569 |
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