STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3390Prophage P3 protein 1, integrase; Belongs to the 'phage' integrase family. (388 aa)    
Predicted Functional Partners:
lp_3389
Prophage P3 protein 2, CI-like repressor.
  
    0.871
lp_3391
Prophage P3 protein 0.
  
    0.762
lp_3392
Transport protein, major facilitator superfamily (MFS).
  
    0.648
lp_3383
Prophage P3 protein 7, DNA replication.
 
     0.615
lp_2473
Prophage P2b protein 8, helicase.
 
    0.517
lp_2448
Prophage P2a protein 9, phage transcription regulator, Cro/CI family.
 
    0.407
purR
Purine biosynthesis operon repressor,phosphoribosyltransferase.
   
    0.404
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.