STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiEMenaquinone/ubiquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (237 aa)    
Predicted Functional Partners:
lp_1715
1,4-dihydroxy-2-naphthoate octaprenyltransferase, UbiA prenyltransferase family.
 
  
 0.931
lp_1135
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
 
 0.930
lp_3236
Short-chain dehydrogenase/oxidoreductase,atypical SDR family, TMR-like.
  
 
  0.902
lp_3432
S-adenosyl-L-methionine binding protein.
  
    0.799
cydD
Cytochrome D ABC transporter, ATP-binding and permease protein.
 
  
 0.759
cydC
Cytochrome D ABC transporter, ATP-binding and permease protein.
 
  
 0.738
hepB2
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
  
 0.718
lp_2820
Hypothetical membrane protein, DUF1440 family.
  
     0.652
hepB1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
  
 0.618
gshAB
Glutathione biosynthesis bifunctional protein: glutamate-cysteine ligase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate-- cysteine ligase type 1 family. Type 2 subfamily.
  
  
 0.551
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.