STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3433Endoglucanase E-like protein, SGNH hydrolase family. (323 aa)    
Predicted Functional Partners:
pbg4
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.718
pbg6
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.718
lp_0384
Hypothetical protein.
  
 
 0.671
lp_3310
Hypothetical membrane protein, VanZ-like family.
  
    0.618
acm3-C
Cell wall hydrolase/muramidase, C-terminal fragment.
  
 
 0.596
lp_2407
Prophage P2a protein 50.
  
 
 0.590
pucR
Purine transport regulator.
  
  
 0.570
pbg8
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.521
pbg10
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.521
lp_3460
Hypothetical protein, DUF2201 family,metallopeptidase-related.
  
    0.515
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.