Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dtpT | pepM | lp_0551 | lp_0257 | Di-/tripeptide transport protein. | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.698 |
| dtpT | pepN | lp_0551 | lp_0937 | Di-/tripeptide transport protein. | Membrane alanine aminopeptidase (aminopeptidase N). | 0.775 |
| dtpT | pepO | lp_0551 | lp_3445 | Di-/tripeptide transport protein. | Endopeptidase PepO. | 0.807 |
| dtpT | pepP | lp_0551 | lp_1595 | Di-/tripeptide transport protein. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.756 |
| dtpT | pepQ | lp_0551 | lp_2258 | Di-/tripeptide transport protein. | Xaa-Pro dipeptidase. | 0.642 |
| dtpT | pepT | lp_0551 | lp_1904 | Di-/tripeptide transport protein. | Tripeptidase, M20B family; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.774 |
| dtpT | pepV | lp_0551 | lp_1321 | Di-/tripeptide transport protein. | Xaa-His dipeptidase. | 0.784 |
| dtpT | pepX | lp_0551 | lp_0857 | Di-/tripeptide transport protein. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.760 |
| pepM | dtpT | lp_0257 | lp_0551 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Di-/tripeptide transport protein. | 0.698 |
| pepM | pepN | lp_0257 | lp_0937 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Membrane alanine aminopeptidase (aminopeptidase N). | 0.823 |
| pepM | pepO | lp_0257 | lp_3445 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Endopeptidase PepO. | 0.782 |
| pepM | pepP | lp_0257 | lp_1595 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.477 |
| pepM | pepQ | lp_0257 | lp_2258 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Xaa-Pro dipeptidase. | 0.778 |
| pepM | pepT | lp_0257 | lp_1904 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Tripeptidase, M20B family; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.786 |
| pepM | pepV | lp_0257 | lp_1321 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Xaa-His dipeptidase. | 0.817 |
| pepM | pepX | lp_0257 | lp_0857 | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | Xaa-Pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family. | 0.772 |
| pepN | dtpT | lp_0937 | lp_0551 | Membrane alanine aminopeptidase (aminopeptidase N). | Di-/tripeptide transport protein. | 0.775 |
| pepN | pepM | lp_0937 | lp_0257 | Membrane alanine aminopeptidase (aminopeptidase N). | Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.823 |
| pepN | pepO | lp_0937 | lp_3445 | Membrane alanine aminopeptidase (aminopeptidase N). | Endopeptidase PepO. | 0.907 |
| pepN | pepP | lp_0937 | lp_1595 | Membrane alanine aminopeptidase (aminopeptidase N). | Xaa-Pro aminopeptidase; Belongs to the peptidase M24B family. | 0.839 |
page 1 of 5