Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cps2C | cps3B | lp_1199 | lp_1216 | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | Glycosyltransferase, family 2 (GT2). | 0.855 |
| cps2C | cps3J | lp_1199 | lp_1227 | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | Glycosyltransferase. | 0.737 |
| cps2C | ram1 | lp_1199 | lp_3471 | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | alpha-L-rhamnosidase. | 0.705 |
| cps2C | ramR | lp_1199 | lp_3476 | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | Transcription regulator, AraC family,GlcNAc-like induced. | 0.639 |
| cps3B | cps2C | lp_1216 | lp_1199 | Glycosyltransferase, family 2 (GT2). | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | 0.855 |
| cps3B | cps3J | lp_1216 | lp_1227 | Glycosyltransferase, family 2 (GT2). | Glycosyltransferase. | 0.888 |
| cps3B | ram1 | lp_1216 | lp_3471 | Glycosyltransferase, family 2 (GT2). | alpha-L-rhamnosidase. | 0.715 |
| cps3B | ramR | lp_1216 | lp_3476 | Glycosyltransferase, family 2 (GT2). | Transcription regulator, AraC family,GlcNAc-like induced. | 0.709 |
| cps3J | cps2C | lp_1227 | lp_1199 | Glycosyltransferase. | Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase. | 0.737 |
| cps3J | cps3B | lp_1227 | lp_1216 | Glycosyltransferase. | Glycosyltransferase, family 2 (GT2). | 0.888 |
| cps3J | ram1 | lp_1227 | lp_3471 | Glycosyltransferase. | alpha-L-rhamnosidase. | 0.553 |
| cps3J | ramR | lp_1227 | lp_3476 | Glycosyltransferase. | Transcription regulator, AraC family,GlcNAc-like induced. | 0.503 |
| glgB | glgP | lp_0020 | lp_0024 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.999 |
| glgB | ram1 | lp_0020 | lp_3471 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | alpha-L-rhamnosidase. | 0.684 |
| glgP | glgB | lp_0024 | lp_0020 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.999 |
| glgP | ram1 | lp_0024 | lp_3471 | Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | alpha-L-rhamnosidase. | 0.876 |
| lp_0935 | ram1 | lp_0935 | lp_3471 | Hypothetical protein. | alpha-L-rhamnosidase. | 0.778 |
| lp_0935 | ramP1 | lp_0935 | lp_3472 | Hypothetical protein. | Disaccharride transporter, major facilitator super family (MFS). | 0.607 |
| lp_0935 | ramP2 | lp_0935 | lp_3474 | Hypothetical protein. | Disaccharride transporter, major facilitator super family (MFS). | 0.711 |
| lp_0935 | ramR | lp_0935 | lp_3476 | Hypothetical protein. | Transcription regulator, AraC family,GlcNAc-like induced. | 0.716 |
page 1 of 3