STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3489Aldo/keto reductase family protein. (340 aa)    
Predicted Functional Partners:
rafP
Lactose/raffinose/galactose permease; PTS regulated carbohydrate transporter, GPH family, raffinose/melibiose/galactose (can switch between symport (H+) and antiport (lactose)).
  
    0.701
galM3
Aldose 1-epimerase.
  
    0.607
lp_2757
Maltogenic alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.569
lp_0096
Hypothetical protein.
   
    0.506
lp_3490
FMN-binding protein.
       0.504
lp_0155
Hypothetical protein.
   
    0.487
lacL
Beta-galactosidase, large subunit.
  
    0.438
lp_2787
Hydrolase, HAD superfamily, Cof family.
  
    0.434
lp_0063
Hypothetical protein.
   
    0.433
glpF5
Glycerol uptake facilitator protein; Probable transporter that facilitates the transmembrane diffusion of an unknown substrate. Is not permeable to water, dihydroxyacetone, glycerol, urea, H(2)O(2) and D/L-lactic acid. Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.413
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.