Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroD3 | aroD4 | lp_3498 | lp_3499 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.748 |
| aroD3 | lp_3497 | lp_3498 | lp_3497 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate transport protein. | 0.941 |
| aroD3 | lp_3500 | lp_3498 | lp_3500 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Short-chain dehydrogenase/oxidoreductase. | 0.776 |
| aroD3 | lp_3501 | lp_3498 | lp_3501 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Sugar phosphate isomerase/epimerase. | 0.840 |
| aroD3 | lp_3502 | lp_3498 | lp_3502 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.726 |
| aroD3 | lp_3503 | lp_3498 | lp_3503 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate transport protein. | 0.767 |
| aroD4 | aroD3 | lp_3499 | lp_3498 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.748 |
| aroD4 | lp_3497 | lp_3499 | lp_3497 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate transport protein. | 0.971 |
| aroD4 | lp_3500 | lp_3499 | lp_3500 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Short-chain dehydrogenase/oxidoreductase. | 0.820 |
| aroD4 | lp_3501 | lp_3499 | lp_3501 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Sugar phosphate isomerase/epimerase. | 0.867 |
| aroD4 | lp_3502 | lp_3499 | lp_3502 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.755 |
| aroD4 | lp_3503 | lp_3499 | lp_3503 | Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Shikimate transport protein. | 0.787 |
| lp_2942 | lp_3206 | lp_2942 | lp_3206 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.644 |
| lp_2942 | lp_3502 | lp_2942 | lp_3502 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.753 |
| lp_2942 | mleR1 | lp_2942 | lp_1116 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Malolactic regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.735 |
| lp_3124 | lp_3502 | lp_3124 | lp_3502 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.666 |
| lp_3124 | mleR1 | lp_3124 | lp_1116 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Malolactic regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.587 |
| lp_3206 | lp_2942 | lp_3206 | lp_2942 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.644 |
| lp_3206 | lp_3502 | lp_3206 | lp_3502 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.565 |
| lp_3206 | mleR1 | lp_3206 | lp_1116 | Transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Malolactic regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.622 |
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