Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fusA1 | pbg10 | lp_0076 | lp_3526 | Elongation factor G. | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.835 |
fusA1 | pgi | lp_0076 | lp_2502 | Elongation factor G. | Glucose-6-phosphate isomerase. | 0.459 |
lp_1573 | pbg10 | lp_1573 | lp_3526 | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.908 |
lp_1573 | pgi | lp_1573 | lp_2502 | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | Glucose-6-phosphate isomerase. | 0.969 |
lp_1573 | pgm | lp_1573 | lp_0764 | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | Phosphoglucomutase. | 0.951 |
lp_1573 | pts33BCA | lp_1573 | lp_3527 | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | PTS system beta-glucoside-specific EIIBCA component. | 0.718 |
lp_1573 | scrB | lp_1573 | lp_0187 | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. | 0.485 |
pbg10 | fusA1 | lp_3526 | lp_0076 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Elongation factor G. | 0.835 |
pbg10 | lp_1573 | lp_3526 | lp_1573 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | 0.908 |
pbg10 | pgi | lp_3526 | lp_2502 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Glucose-6-phosphate isomerase. | 0.906 |
pbg10 | pgm | lp_3526 | lp_0764 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Phosphoglucomutase. | 0.900 |
pbg10 | pts15B | lp_3526 | lp_1399 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | PTS system, beta-glucosides-specific EIIB component. | 0.780 |
pbg10 | pts20A | lp_3526 | lp_2780 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | PTS system, cellobiose-specific EIIA component. | 0.782 |
pbg10 | pts20B | lp_3526 | lp_2781 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | PTS system, cellobiose-specific EIIB component. | 0.786 |
pbg10 | pts23B | lp_3526 | lp_3009 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | PTS system, cellobiose-specific EIIB component. | 0.785 |
pbg10 | pts33BCA | lp_3526 | lp_3527 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | PTS system beta-glucoside-specific EIIBCA component. | 0.855 |
pbg10 | scrB | lp_3526 | lp_0187 | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. | 0.954 |
pgi | fusA1 | lp_2502 | lp_0076 | Glucose-6-phosphate isomerase. | Elongation factor G. | 0.459 |
pgi | lp_1573 | lp_2502 | lp_1573 | Glucose-6-phosphate isomerase. | Bifunctional protein: transcription regulator; sugar kinase, ROK family. | 0.969 |
pgi | pbg10 | lp_2502 | lp_3526 | Glucose-6-phosphate isomerase. | 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. | 0.906 |
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