Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpH | bsh1 | lp_2367 | lp_3536 | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | 0.501 |
| atpH | cfa2 | lp_2367 | lp_3174 | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.561 |
| atpH | gshR1 | lp_2367 | lp_0369 | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Glutathione reductase. | 0.448 |
| atpH | gshR4 | lp_2367 | lp_3267 | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Glutathione reductase. | 0.671 |
| atpH | opuA | lp_2367 | lp_1607 | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein. | 0.728 |
| bsh1 | atpH | lp_3536 | lp_2367 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.501 |
| bsh1 | cfa2 | lp_3536 | lp_3174 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Cyclopropane-fatty-acyl-phospholipid synthase. | 0.678 |
| bsh1 | gadB | lp_3536 | lp_3420 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.608 |
| bsh1 | gshR1 | lp_3536 | lp_0369 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Glutathione reductase. | 0.539 |
| bsh1 | gshR4 | lp_3536 | lp_3267 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Glutathione reductase. | 0.590 |
| bsh1 | lp_3535 | lp_3536 | lp_3535 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Hypothetical protein. | 0.527 |
| bsh1 | msa | lp_3536 | lp_1229 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Mannose-specific adhesin, LPXTG-motif cell wall anchor. | 0.552 |
| bsh1 | mvaA | lp_3536 | lp_0447 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family. | 0.715 |
| bsh1 | opuA | lp_3536 | lp_1607 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein. | 0.642 |
| bsh1 | pva3 | lp_3536 | lp_2572 | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | Penicillin V acylase family protein. | 0.495 |
| cfa2 | atpH | lp_3174 | lp_2367 | Cyclopropane-fatty-acyl-phospholipid synthase. | H(+)-transporting two-sector ATPase, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family. | 0.561 |
| cfa2 | bsh1 | lp_3174 | lp_3536 | Cyclopropane-fatty-acyl-phospholipid synthase. | Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family. | 0.678 |
| cfa2 | gshR1 | lp_3174 | lp_0369 | Cyclopropane-fatty-acyl-phospholipid synthase. | Glutathione reductase. | 0.553 |
| cfa2 | gshR4 | lp_3174 | lp_3267 | Cyclopropane-fatty-acyl-phospholipid synthase. | Glutathione reductase. | 0.631 |
| cfa2 | opuA | lp_3174 | lp_1607 | Cyclopropane-fatty-acyl-phospholipid synthase. | Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein. | 0.703 |
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