Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
pts34BPTS system, lactose/cellobiose-specific EIIB component. (98 aa)    
Predicted Functional Partners:
lp_3540
PTS system, ascorbate-specific EIIC component.
 
 
 0.998
pts34A
PTS system, mannitol-specific EIIA component.
 
 
 0.995
pts25B
PTS system, EIIB component.
  
 
 
0.916
lp_3543
Bifunctional protein: transcription regulator; PTS system, mannitol(cryptic)-specific EIIA component.
 
  
 0.915
ptsH
Phosphocarrier protein Hpr.
    
 0.906
tal2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
    0.869
lp_3136
Sugar-specific permease, SgaT/UlaA family.
 
   
 0.818
lp_3138
Bifunctional protein: transcriptional antiterminator, BglG family; PTS system, EIIA component.
 
    0.789
tkt4
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
  
 0.744
lp_3537
Hydrolase, HAD superfamily, Cof family.
  
  
 0.667
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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