STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3545D-arabitol-phosphate dehydrogenase. (352 aa)    
Predicted Functional Partners:
pts35C
PTS system, galactitol-specific EIIC component.
  
 0.978
sacK1
Fructokinase.
 
 
 0.966
sacK2
Fructokinase.
 
 
 0.961
pts35B
PTS system, galactitol-specific EIIB component.
 
  
 0.941
pts35A
PTS system, galactitol-specific EIIA component.
 
    0.934
fruA
PTS system, fructose-specific EIIABC component.
  
 
 0.913
pts10B
PTS system, mannose-specific EIIB component.
  
 
  0.903
pgi
Glucose-6-phosphate isomerase.
  
 
 0.547
gph3
Phosphohydrolase, possibly 2-phosphoglycolate phosphohydrolase or inorganic pyrophosphatase.
  
    0.543
adhE
Bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.527
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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