STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araPArabinose (promiscuous) transporter, major facilitator superfamily (MFS); Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (466 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
 
  
 0.917
araD
L-ribulose 5-phosphate 4-epimerase.
 
  
 0.883
araR
Transcription regulator, GntR family.
 
   
 0.860
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.803
araO
Arabinose O-acetyltransferase.
  
  
 0.707
napA4
Na(+)/H(+) antiporter.
   
  
 0.665
lp_3577
Hypothetical membrane protein.
   
  
 0.654
lp_3575
Hypothetical membrane protein.
   
  
 0.642
pts38BC
PTS system, glucitol/sorbitol-specific EIIB component and second of two IIC components.
   
  
 0.521
lp_3643
ABC transporter, permease protein,mannose-related oligosaccharides.
   
  
 0.518
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.