STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lamATwo-component system response regulator; accesory gene regulator protein A. (247 aa)    
Predicted Functional Partners:
lamC
Two-component system histidine protein kinase; sensor protein.
 
 
 0.986
lamK
Two-component system histidine protein kinase; sensor protein.
 
 
 0.954
pltK
Two-component system histidine protein kinase; sensor protein.
 
 
 0.953
hpk9
Two-component system histidine protein kinase; sensor protein.
 
 
 0.923
plnB
Two-componet system histidine protein kinase PlnB; sensor protein.
 
 
 0.922
lamB
Auto-inducing peptide (AIP) export/modification protein; May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor; Belongs to the AgrB family.
  
  
 0.918
lp_1953
Hypothetical protein, DUF2992 family.
      
 0.840
spx5
RNA polymerase (RNAP)-binding regulatory protein, arsenate reductase (ArsC) family, Spx subfamily; Belongs to the ArsC family.
 
    0.836
rrp8
Two-component system response regulator.
  
     0.748
plnG
Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG.
 
  
 0.604
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.