Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| araD | rhaB | lp_3555 | lp_3595 | L-ribulose 5-phosphate 4-epimerase. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.755 |
| lp_3603 | rhaB | lp_3603 | lp_3595 | Sugar-phosphate aldolase. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.586 |
| lp_3603 | rhaD | lp_3603 | lp_3592 | Sugar-phosphate aldolase. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.922 |
| lp_3603 | rhaM | lp_3603 | lp_3594 | Sugar-phosphate aldolase. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.462 |
| lp_3603 | rhaT | lp_3603 | lp_3596 | Sugar-phosphate aldolase. | Beta-rhamnose transporter, major facilitator superfamily (MFS). | 0.581 |
| mdxF | rhaA | lp_0176 | lp_3593 | Maltodextrin ABC transporter, permease protein. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.511 |
| mdxF | rhaB | lp_0176 | lp_3595 | Maltodextrin ABC transporter, permease protein. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.539 |
| mdxF | rhaD | lp_0176 | lp_3592 | Maltodextrin ABC transporter, permease protein. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.541 |
| mdxF | rhaM | lp_0176 | lp_3594 | Maltodextrin ABC transporter, permease protein. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.509 |
| mrr | rhaB | lp_1858 | lp_3595 | Mrr restriction system protein. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.547 |
| mrr | rhaD | lp_1858 | lp_3592 | Mrr restriction system protein. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.554 |
| ram2 | rhaA | lp_3473 | lp_3593 | alpha-L-rhamnosidase. | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | 0.519 |
| ram2 | rhaB | lp_3473 | lp_3595 | alpha-L-rhamnosidase. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.589 |
| ram2 | rhaM | lp_3473 | lp_3594 | alpha-L-rhamnosidase. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.427 |
| ram2 | rhaR | lp_3473 | lp_3597 | alpha-L-rhamnosidase. | Transcription regulator, AraC family, GlcNAc-like induced. | 0.502 |
| rhaA | mdxF | lp_3593 | lp_0176 | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | Maltodextrin ABC transporter, permease protein. | 0.511 |
| rhaA | ram2 | lp_3593 | lp_3473 | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | alpha-L-rhamnosidase. | 0.519 |
| rhaA | rhaB | lp_3593 | lp_3595 | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.999 |
| rhaA | rhaD | lp_3593 | lp_3592 | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. | 0.994 |
| rhaA | rhaM | lp_3593 | lp_3594 | L-rhamnose isomerase; Belongs to the rhamnose isomerase family. | L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose. | 0.999 |
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