STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_3648ABC transporter, ATP-binding and permease protein. (596 aa)    
Predicted Functional Partners:
glnQ1
Glutamine ABC transporter, ATP-binding protein.
 
     
0.900
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
   
0.899
lp_3225
ABC transporter, ATP-binding protein.
 
     
0.899
lp_1750
Iron ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   
0.874
lp_3647
ABC transporter, ATP-binding and permease protein.
 
   
0.817
lp_3646
Transcription regulator, AraC family.
 
    0.783
oppF
Oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
     
0.773
gcnA
Beta hexosamidase or lacto-N-biosidase or beta N-acetylglucosamidase.
 
    0.751
glnQ2
Glutamine ABC transporter, ATP-binding protein.
 
     
0.728
lp_2739
ABC transporter, ATP-binding protein.
 
  
0.689
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.