STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636415_00682Unannotated protein. (399 aa)    
Predicted Functional Partners:
GCA_001636415_03725
Unannotated protein.
    
  0.994
GCA_001636415_00683
Unannotated protein.
 
 
  0.991
GCA_001636415_00681
Unannotated protein.
 
 
 0.983
GCA_001636415_05112
Unannotated protein.
 
 
 0.912
GCA_001636415_04916
Unannotated protein.
 
  
  0.851
GCA_001636415_05110
Unannotated protein.
 
 
 
0.851
GCA_001636415_03805
Unannotated protein.
 
 
 0.831
GCA_001636415_01652
Unannotated protein.
 
 
 0.824
GCA_001636415_04949
Unannotated protein.
    
  0.824
GCA_001636415_04243
Unannotated protein.
    
  0.822
Your Current Organism:
Bacillus drentensis
NCBI taxonomy Id: 220684
Other names: B. drentensis, Bacillus drentensis Heyrman et al. 2004, Bacillus sp. BHR1P2B1, DSM 15600, JCM 21707, LMG 21831, LMG:21831, NBRC 102427, strain IDA1967, strain R-16337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.