STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLT18275.1Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)    
Predicted Functional Partners:
nrfA
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.
 
 0.987
KLT18276.1
NapC/NirT cytochrome c domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.784
KLT18278.1
NHL repeat containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.758
nrfH
nitrate/TMAO reductase membrane-bound tetraheme cytochrome C subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.729
KLT15320.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.724
KLT18277.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.719
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O; Belongs to the HCP family.
    
 0.701
narK
Nitrate/nitrite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.675
KLT17034.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.668
KLT15776.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.668
Your Current Organism:
Bacillus vireti
NCBI taxonomy Id: 220686
Other names: B. vireti, Bacillus vireti Heyrman et al. 2004, DSM 15602, JCM 21711, LMG 21834, LMG:21834, NBRC 102452, strain IDA3632, strain R-15447
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.