STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLT16559.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)    
Predicted Functional Partners:
KLT16558.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.967
KLT16609.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.945
KLT16560.1
Transcriptional regulatory protein DesR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.926
KLT15833.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.692
KLT15832.1
Bacteriocin biosynthesis protein SagD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.567
KLT19298.1
Transcriptional regulatory protein DesR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.555
KLT15541.1
Teichoic acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.522
KLT15594.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.456
KLT16534.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.444
KLT19297.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.431
Your Current Organism:
Bacillus vireti
NCBI taxonomy Id: 220686
Other names: B. vireti, Bacillus vireti Heyrman et al. 2004, DSM 15602, JCM 21711, LMG 21834, LMG:21834, NBRC 102452, strain IDA3632, strain R-15447
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.