STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLT15822.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
KLT16015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
  
 
0.539
KLT18218.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.518
KLT15673.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
   
  0.516
KLT18298.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.503
KLT16534.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.473
KLT19506.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.450
KLT16720.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.450
KLT19691.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.448
KLT19692.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.448
KLT19693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.448
Your Current Organism:
Bacillus vireti
NCBI taxonomy Id: 220686
Other names: B. vireti, Bacillus vireti Heyrman et al. 2004, DSM 15602, JCM 21711, LMG 21834, LMG:21834, NBRC 102452, strain IDA3632, strain R-15447
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.