STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636395_00297Unannotated protein. (415 aa)    
Predicted Functional Partners:
GCA_001636395_05536
Unannotated protein.
  
 
 0.651
GCA_001636395_03737
Unannotated protein.
  
 
  0.535
GCA_001636395_05424
Unannotated protein.
 
  
 0.529
GCA_001636395_02329
Unannotated protein.
  
  
 0.514
GCA_001636395_05120
Unannotated protein.
     
 0.506
GCA_001636395_02453
Unannotated protein.
  
  
 0.466
GCA_001636395_05344
Unannotated protein.
  
  
 0.461
GCA_001636395_00673
Unannotated protein.
     
 0.433
GCA_001636395_03916
Unannotated protein.
    
  0.426
GCA_001636395_01567
Unannotated protein.
    
   0.418
Your Current Organism:
Bacillus novalis
NCBI taxonomy Id: 220687
Other names: B. novalis, Bacillus novalis Heyrman et al. 2004, DSM 15603, JCM 21709, LMG 21837, LMG:21837, NBRC 102450, strain IDA3307, strain R-15439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.