STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636395_00716Unannotated protein. (251 aa)    
Predicted Functional Partners:
GCA_001636395_03230
Unannotated protein.
 
  
 0.848
GCA_001636395_01236
Unannotated protein.
  
    0.817
GCA_001636395_03231
Unannotated protein.
  
 
 0.769
GCA_001636395_01270
Unannotated protein.
  
   
 0.708
GCA_001636395_03815
Unannotated protein.
  
  
 0.682
GCA_001636395_03406
Unannotated protein.
  
   
 0.667
GCA_001636395_02288
Unannotated protein.
  
  
  0.666
GCA_001636395_05439
Unannotated protein.
 
  
  0.651
GCA_001636395_01774
Unannotated protein.
  
   
 0.636
GCA_001636395_03814
Unannotated protein.
 
  
  0.635
Your Current Organism:
Bacillus novalis
NCBI taxonomy Id: 220687
Other names: B. novalis, Bacillus novalis Heyrman et al. 2004, DSM 15603, JCM 21709, LMG 21837, LMG:21837, NBRC 102450, strain IDA3307, strain R-15439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.