STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636395_03335Unannotated protein. (293 aa)    
Predicted Functional Partners:
GCA_001636395_01119
Unannotated protein.
  
     0.736
GCA_001636395_02942
Unannotated protein.
  
     0.725
GCA_001636395_03701
Unannotated protein.
  
     0.706
GCA_001636395_03136
Unannotated protein.
  
     0.703
GCA_001636395_02946
Unannotated protein.
  
     0.698
GCA_001636395_02809
Unannotated protein.
  
     0.697
GCA_001636395_00573
Unannotated protein.
  
     0.687
GCA_001636395_03343
Unannotated protein.
 
   
 0.687
GCA_001636395_05069
Unannotated protein.
  
     0.685
GCA_001636395_03378
Unannotated protein.
  
     0.678
Your Current Organism:
Bacillus novalis
NCBI taxonomy Id: 220687
Other names: B. novalis, Bacillus novalis Heyrman et al. 2004, DSM 15603, JCM 21709, LMG 21837, LMG:21837, NBRC 102450, strain IDA3307, strain R-15439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.