STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636395_04267Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_001636395_03534
Unannotated protein.
    
 0.857
GCA_001636395_01206
Unannotated protein.
   
 0.839
GCA_001636395_01500
Unannotated protein.
   
 0.839
GCA_001636395_02098
Unannotated protein.
   
  0.827
GCA_001636395_03533
Unannotated protein.
   
  0.827
GCA_001636395_04669
Unannotated protein.
   
  0.827
GCA_001636395_04673
Unannotated protein.
    
  0.822
GCA_001636395_04671
Unannotated protein.
    
  0.803
GCA_001636395_04672
Unannotated protein.
    
  0.800
GCA_001636395_04670
Unannotated protein.
    
  0.790
Your Current Organism:
Bacillus novalis
NCBI taxonomy Id: 220687
Other names: B. novalis, Bacillus novalis Heyrman et al. 2004, DSM 15603, JCM 21709, LMG 21837, LMG:21837, NBRC 102450, strain IDA3307, strain R-15439
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.