STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001636395_04574Unannotated protein. (464 aa)    
Predicted Functional Partners:
GCA_001636395_00032
Unannotated protein.
  
  
 0.853
GCA_001636395_03950
Unannotated protein.
  
  
 0.853
GCA_001636395_03964
Unannotated protein.
  
  
 0.705
GCA_001636395_04578
Unannotated protein.
 
 
 0.521
GCA_001636395_04586
Unannotated protein.
 
  
 0.509
GCA_001636395_04584
Unannotated protein.
 
  
 0.500
GCA_001636395_04577
Unannotated protein.
  
  
 0.499
GCA_001636395_04576
Unannotated protein.
  
    0.486
GCA_001636395_04583
Unannotated protein.
  
  
 0.469
GCA_001636395_04579
Unannotated protein.
  
  
 0.466
Your Current Organism:
Bacillus novalis
NCBI taxonomy Id: 220687
Other names: B. novalis, Bacillus novalis Heyrman et al. 2004, DSM 15603, JCM 21709, LMG 21837, LMG:21837, NBRC 102450, strain IDA3307, strain R-15439
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.