STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW73880.1Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family. (241 aa)    
Predicted Functional Partners:
ORW73879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.851
ORW73881.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.816
ORW73921.1
Dihydrodipicolinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.640
ORW73878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.518
ORW73916.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
    
0.452
ORW71380.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.450
ORW71364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.448
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.