STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW74391.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)    
Predicted Functional Partners:
ORW74390.1
precorrin-6Y-methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.961
ORW74389.1
cobalt-precorrin-6A reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.887
ORW74464.1
Precorrin-4 C(11)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.
       0.887
ORW72848.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.832
ORW74392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.789
ORW64681.1
Phosphoribose diphosphate--decaprenyl-phosphate phosphoribosyltransferase; Catalyzes the formation of decaprenylphosphoryl-5-phosphoribose from phosphoribose diphosphate and decaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family.
 
  
 0.782
ORW64618.1
decaprenylphosphoryl-beta-D-ribose oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
ORW64883.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.772
ORW75146.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.772
ORW65898.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.772
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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