STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW73270.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
ORW73271.1
Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
ORW70746.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.912
ORW68049.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.910
ORW72261.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.907
ORW70449.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.901
ORW71528.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.870
ORW65914.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.831
ORW73254.1
Protein-glutamate methylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.828
ORW63983.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.795
ORW71527.1
Fused response regulator/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.790
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.