STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW71065.1Hydrogenase maturation protein HypF; Derived by automated computational analysis using gene prediction method: Protein Homology. (777 aa)    
Predicted Functional Partners:
ORW71106.1
Hydrogenase expression/formation protein HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
AWC23_06750
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.983
ORW71061.1
Hydrogenase formation protein HupD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
ORW71066.1
Hydantoin utilization protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
ORW71062.1
Hydrogenase assembly protein HupF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.869
ORW73523.1
Hydrogenase formation protein HupD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.851
ORW73524.1
Hydrogenase assembly protein HypC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.850
ORW71067.1
Peptidase M52; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.844
ORW71074.1
Hydrogenase expression protein HupH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
ORW71063.1
Phosphoheptose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.812
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.