STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW70110.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (401 aa)    
Predicted Functional Partners:
ORW64632.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.965
ORW70217.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.931
ORW70218.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.931
ORW69151.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.924
ORW70109.1
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.894
ORW64883.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW75146.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW65898.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.888
ORW64109.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.835
ORW73099.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.791
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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