STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW69891.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (983 aa)    
Predicted Functional Partners:
ORW63950.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
ORW71170.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.586
ORW72134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.548
ORW73138.1
Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
ORW74265.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.491
ORW69892.1
Transposase; Required for the transposition of the insertion element.
       0.477
ORW63883.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
ORW74788.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
AWC23_12595
tRNA-Thr; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.428
ORW69879.1
PRTRC system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.428
Your Current Organism:
Mycobacterium saskatchewanense
NCBI taxonomy Id: 220927
Other names: ATCC BAA-544, CIP 108114, DSM 44616, JCM 13016, M. saskatchewanense, Mycobacterium saskatchewanense Turenne et al. 2004, strain 00-250
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.