Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIN93461.1RelB/DinJ family addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
AIN93464.1
RelB/DinJ family addiction module antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
AIN93664.1
Damage-inducible protein J; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
AIN92880.1
DNA-damage-inducible protein J; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
AIN94029.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.614
AIN93804.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.527
AIN94869.1
Toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.527
AIN94429.1
RelE/StbE family addiction module toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.448
Your Current Organism:
Treponema putidum
NCBI taxonomy Id: 221027
Other names: ATCC 700334, CIP 108088, OMZ 758, T. putidum, Treponema putidum Wyss et al. 2004, strain JZC3
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