STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIN94069.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)    
Predicted Functional Partners:
AIN94068.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.828
AIN93885.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.602
AIN94076.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.594
AIN94071.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.508
AIN94070.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.499
AIN94666.1
GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.499
AIN93641.1
Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
AIN93642.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.446
AIN94075.1
Cobalt transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.436
AIN94294.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
Your Current Organism:
Treponema putidum
NCBI taxonomy Id: 221027
Other names: ATCC 700334, CIP 108088, OMZ 758, T. putidum, Treponema putidum Wyss et al. 2004, strain JZC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.