STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIN94900.1Manganese ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
AIN94901.1
Zinc transport system membrane protein TroC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
AIN94899.1
Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.997
AIN93836.1
Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.928
AIN94092.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.913
AIN94898.1
40-residue YVTN family beta-propeller; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.497
AIN93609.1
Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.467
AIN94318.1
Zinc ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.467
AIN94902.1
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.422
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.419
Your Current Organism:
Treponema putidum
NCBI taxonomy Id: 221027
Other names: ATCC 700334, CIP 108088, OMZ 758, T. putidum, Treponema putidum Wyss et al. 2004, strain JZC3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.