STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OB0074Stage II sporulation protein E; CDS_ID OB0074. (818 aa)    
Predicted Functional Partners:
OB0076
Serine:threonine protein kinase; CDS_ID OB0076.
 
 
 0.933
spoIIGA
Stage II sporulation protein GA (sporulation sigma E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
  
 0.931
OB0075
Hypothetical conserved protein; CDS_ID OB0075.
 
     0.884
spoIIR
Stage II sporulation protein R (pro-sigma-E processing factor); CDS_ID OB2996.
  
   
 0.830
spoIIP
Stage II sporulation protein P (septal wall dissolution protein); CDS_ID OB1974.
  
   
 0.816
spoIIM
Stage II sporulation protein M (septal cell wall dissolution factor); Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
   
 0.802
spoIIIAG
Stage III sporulation protein AG (mutants block sporulation after engulfment); CDS_ID OB1888.
  
   
 0.800
OB2959
Transcriptional regulator of sigma-E- and sigma-K-dependent; CDS_ID OB2959.
  
   
 0.789
OB0068
Hypothetical conserved protein; CDS_ID OB0068.
 
     0.787
spoIIIAE
Stage III sporulation protein AE (mutants block sporulation after engulfment); CDS_ID OB1890.
  
     0.773
Your Current Organism:
Oceanobacillus iheyensis
NCBI taxonomy Id: 221109
Other names: O. iheyensis HTE831, Oceanobacillus iheyensis HTE831, Oceanobacillus iheyensis str. HTE831, Oceanobacillus iheyensis strain HTE831, marine firmicute HTE831
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.